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    Differential Evolution for the Optimization of DMSO-Free Cryoprotectants: Influence of Control Parameters

    Source: Journal of Biomechanical Engineering:;2020:;volume( 142 ):;issue: 007
    Author:
    Pi, Chia-Hsing
    ,
    Dosa, Peter I.
    ,
    Hubel, Allison
    DOI: 10.1115/1.4045815
    Publisher: The American Society of Mechanical Engineers (ASME)
    Abstract: This study presents the influence of control parameters including population (NP) size, mutation factor (F), crossover (Cr), and four types of differential evolution (DE) algorithms including random, best, local-to-best, and local-to-best with self-adaptive (SA) modification for the purpose of optimizing the compositions of dimethylsufloxide (DMSO)-free cryoprotectants. Post-thaw recovery of Jurkat cells cryopreserved with two DMSO-free cryoprotectants at a cooling rate of 1 °C/min displayed a nonlinear, four-dimensional structure with multiple saddle nodes, which was a suitable training model to tune the control parameters and select the most appropriate type of differential evolution algorithm. Self-adaptive modification presented better performance in terms of optimization accuracy and sensitivity of mutation factor and crossover among the four different types of algorithms tested. Specifically, the classical type of differential evolution algorithm exhibited a wide acceptance to mutation factor and crossover. The optimization performance is more sensitive to mutation than crossover and the optimization accuracy is proportional to the population size. Increasing population size also reduces the sensitivity of the algorithm to the value of the mutation factor and crossover. The analysis of optimization accuracy and convergence speed suggests larger population size with F > 0.7 and Cr > 0.3 are well suited for use with cryopreservation optimization purposes. The tuned differential evolution algorithm is validated through finding global maximums of other two DMSO-free cryoprotectant formulation datasets. The results of these studies can be used to help more efficiently determine the optimal composition of multicomponent DMSO-free cryoprotectants in the future.
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      Differential Evolution for the Optimization of DMSO-Free Cryoprotectants: Influence of Control Parameters

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    contributor authorPi, Chia-Hsing
    contributor authorDosa, Peter I.
    contributor authorHubel, Allison
    date accessioned2022-02-04T14:16:19Z
    date available2022-02-04T14:16:19Z
    date copyright2020/03/04/
    date issued2020
    identifier issn0148-0731
    identifier otherbio_142_07_071006.pdf
    identifier urihttp://yetl.yabesh.ir/yetl1/handle/yetl/4273318
    description abstractThis study presents the influence of control parameters including population (NP) size, mutation factor (F), crossover (Cr), and four types of differential evolution (DE) algorithms including random, best, local-to-best, and local-to-best with self-adaptive (SA) modification for the purpose of optimizing the compositions of dimethylsufloxide (DMSO)-free cryoprotectants. Post-thaw recovery of Jurkat cells cryopreserved with two DMSO-free cryoprotectants at a cooling rate of 1 °C/min displayed a nonlinear, four-dimensional structure with multiple saddle nodes, which was a suitable training model to tune the control parameters and select the most appropriate type of differential evolution algorithm. Self-adaptive modification presented better performance in terms of optimization accuracy and sensitivity of mutation factor and crossover among the four different types of algorithms tested. Specifically, the classical type of differential evolution algorithm exhibited a wide acceptance to mutation factor and crossover. The optimization performance is more sensitive to mutation than crossover and the optimization accuracy is proportional to the population size. Increasing population size also reduces the sensitivity of the algorithm to the value of the mutation factor and crossover. The analysis of optimization accuracy and convergence speed suggests larger population size with F > 0.7 and Cr > 0.3 are well suited for use with cryopreservation optimization purposes. The tuned differential evolution algorithm is validated through finding global maximums of other two DMSO-free cryoprotectant formulation datasets. The results of these studies can be used to help more efficiently determine the optimal composition of multicomponent DMSO-free cryoprotectants in the future.
    publisherThe American Society of Mechanical Engineers (ASME)
    titleDifferential Evolution for the Optimization of DMSO-Free Cryoprotectants: Influence of Control Parameters
    typeJournal Paper
    journal volume142
    journal issue7
    journal titleJournal of Biomechanical Engineering
    identifier doi10.1115/1.4045815
    page71006
    treeJournal of Biomechanical Engineering:;2020:;volume( 142 ):;issue: 007
    contenttypeFulltext
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    DSpace software copyright © 2002-2015  DuraSpace
    نرم افزار کتابخانه دیجیتال "دی اسپیس" فارسی شده توسط یابش برای کتابخانه های ایرانی | تماس با یابش
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