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    Coupling of Bond Breaking With State Transition Leads to High Apparent Detachment Rates of a Single Myosin

    Source: Journal of Applied Mechanics:;2016:;volume( 083 ):;issue: 005::page 51011
    Author:
    Dong, C.
    ,
    Chen, B.
    DOI: 10.1115/1.4032860
    Publisher: The American Society of Mechanical Engineers (ASME)
    Abstract: Quantifying interactions between motors and filaments is important for the understanding of intriguing emergent behaviors of motor–filament systems, which play critical roles in various biological processes. Recently, unusually high detachment rates of a myosin from actin were obtained with a force spectroscopy technique of an unprecedented spatial–temporal resolution. Here, we suggest that these high apparent detachment rates may be due to the inherent coupling between bond breaking and state transition, which can be common in protein–protein interactions. Based on a kinetic model for the chemomechanical cycle of single myosin, rates of bond breaking between myosin and actin at different nucleotide states are systematically calculated. These quantitative results indicate that myosins may adopt much higher transition rates than bond breaking rates at different nucleotide states under physiological conditions when applied forces are relatively low. This work also indicates that accurate biophysical models considering both protein unbinding dynamics and protein state transitions are required in order to properly interpret the experimental data when the ultrafast forceclamp spectroscopy technique is employed to study, for example, the DNA–protein interactions.
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      Coupling of Bond Breaking With State Transition Leads to High Apparent Detachment Rates of a Single Myosin

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    contributor authorDong, C.
    contributor authorChen, B.
    date accessioned2017-05-09T01:25:40Z
    date available2017-05-09T01:25:40Z
    date issued2016
    identifier issn0021-8936
    identifier otherjam_083_05_051011.pdf
    identifier urihttp://yetl.yabesh.ir/yetl/handle/yetl/160248
    description abstractQuantifying interactions between motors and filaments is important for the understanding of intriguing emergent behaviors of motor–filament systems, which play critical roles in various biological processes. Recently, unusually high detachment rates of a myosin from actin were obtained with a force spectroscopy technique of an unprecedented spatial–temporal resolution. Here, we suggest that these high apparent detachment rates may be due to the inherent coupling between bond breaking and state transition, which can be common in protein–protein interactions. Based on a kinetic model for the chemomechanical cycle of single myosin, rates of bond breaking between myosin and actin at different nucleotide states are systematically calculated. These quantitative results indicate that myosins may adopt much higher transition rates than bond breaking rates at different nucleotide states under physiological conditions when applied forces are relatively low. This work also indicates that accurate biophysical models considering both protein unbinding dynamics and protein state transitions are required in order to properly interpret the experimental data when the ultrafast forceclamp spectroscopy technique is employed to study, for example, the DNA–protein interactions.
    publisherThe American Society of Mechanical Engineers (ASME)
    titleCoupling of Bond Breaking With State Transition Leads to High Apparent Detachment Rates of a Single Myosin
    typeJournal Paper
    journal volume83
    journal issue5
    journal titleJournal of Applied Mechanics
    identifier doi10.1115/1.4032860
    journal fristpage51011
    journal lastpage51011
    identifier eissn1528-9036
    treeJournal of Applied Mechanics:;2016:;volume( 083 ):;issue: 005
    contenttypeFulltext
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    DSpace software copyright © 2002-2015  DuraSpace
    نرم افزار کتابخانه دیجیتال "دی اسپیس" فارسی شده توسط یابش برای کتابخانه های ایرانی | تماس با یابش
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